miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|282493549|gb|GW213371.1|GW213371 AGTGTCATAGTTTCTCTTAAGATGGCATTGAAAAGAATGTCGTCGCTTCCTGTTGGGAAAGCAATTGTTGTACATGGAGC
CGAGTTGGAAATTCTCAGCCGTCTAGGCAGTGGAGCGTTTGGTGTTGTGTACAAAGCCAGAGATTTGTTAAGCAGCGTTC
CGCTATTCTACGCACTTAAAGATGTGGTCTGTTCGAATTCATCCTCTCTTGGCAAAGCTATTAGTGAAGTAGAAACTCTT
CGTCGAATTGATCACGACTTTATTGTCAAAATTATAGCCGCCGATCAGCTGGACGATCGACGCGGAATGTCTCATGTTTT
AATCCTGACCGAATACTGCTCTGGTGGCACCTTAAACGAACGGCTATCGGAACCCAGCAGCGAAGAAACGACTCTGAAGT
GGCTGTGTCAAATGGCAAGCGCTTTGAGTTACCTCCACTCTCGACATATTGTCCATCGTGACTTAAAACCCGACAATGTT
TTACTGTCAGATTCAGTGAACGAAAACCTGAAACTGGGAGATTTTGGCTTAGCGAGGGAGTTTCTGGCCTTAAAGCAAGA
CAATTCACATCAATCCCCAATGGGCTTAGCAGAGTACTACATGCAGTCAGGAACAGGCCCAGCGCACTGGATGGCCCCTG
AAGTCTTTCGATGTCATTACACAGAAAAGGCAGATATATTCTCCCTCGGAGTTCTATTCAACGCAATTC




Most similar to sp|Q80ZW0|STK35_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q80ZW0|STK35_MOUSE Serine/threonine-protein kinase 35 OS=Mus
           musculus GN=Stk35 PE=2 SV=3
          Length = 539

 Score =  109 bits (272), Expect = 2e-23
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 42/248 (16%)
 Frame = +1

Query: 91  ILSRLGSGAFGVVYKARDLLSSVPLFYALKDVVCSNSSSLGKAISEVETLRRID--HDFI 264
           +L+ +G G++GVVY+A    S   +  A+K + C    ++  A++E   L  +   H  I
Sbjct: 209 LLAEIGRGSYGVVYEAVAGRSGARV--AVKKIRCDAPENVELALAEFWALTSLKRRHQNI 266

Query: 265 VK----IIAADQLDDRRGMSH------------------------------VLILTEYCS 342
           V+    ++  + L  R  MSH                              +  + EYC 
Sbjct: 267 VQFEECVLQRNGLAQR--MSHGNKNSQLYLRLVETSLKGERILGYAEEPCYLWFVMEYCE 324

Query: 343 GGTLNER-LSEPSSEETTLKWLCQMASALSYLHSRHIVHRDLKPDNVLLSD-SVNENLKL 516
           GG LN+  LS      T   ++ Q+ SA+++LH  HIVHRDLKPDN+L+++ S    LK+
Sbjct: 325 GGDLNQYVLSRRPDPATNKSFMLQLTSAIAFLHKNHIVHRDLKPDNILITERSGTPILKV 384

Query: 517 GDFGLAREFLAL----KQDNSHQSPMGLAEYYMQSGTGPAHWMAPEVFRCHYTEKADIFS 684
            DFGL++    L    K+ N     + + +Y++ S  G   +MAPEV+  HYT KADIF+
Sbjct: 385 ADFGLSKVCAGLAPRGKEGNQDNKNVNVNKYWLSSACGSDFYMAPEVWEGHYTAKADIFA 444

Query: 685 LGVLFNAI 708
           LG++  A+
Sbjct: 445 LGIIIWAM 452